ISMARA results for GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ 7.110 YBX1
FOS
NFYC
NFYA
NFYB
CEBPZ
NRF1 5.829 NRF1
ELF2_GABPA_ELF5 4.996
ZBTB33_CHD2 4.620 ZBTB33
CHD2
TAF1 4.423 TAF1
MXI1_MYC_MYCN 4.344 MXI1
MYC
MYCN
ZNF711_TFAP2A_TFAP2D 4.071 ZNF711
TFAP2A
TFAP2D
RFX3_RFX2 4.013 RFX3
RFX2
E2F7_E2F1 3.950 E2F7
E2F1
ZNF143 3.900 ZNF143
WRNIP1 3.631 WRNIP1
ID4_TCF4_SNAI2 3.475 ID4
TCF4
SNAI2
WT1_MTF1_ZBTB7B 3.341 WT1
MTF1
ZBTB7B
IRF2_STAT2_IRF8_IRF1 3.276 IRF2
STAT2
IRF8
IRF1
MYB 3.182 MYB
SMAD1 3.163 SMAD1
POU5F1_POU2F3 3.153 POU5F1
POU2F3
ELK4_ETV5_ELK1_ELK3_ELF4 3.125 ELK4
ETV5
ELK1
ELK3
ELF4
SPI1 3.044 SPI1
GMEB2 2.984 GMEB2
E2F2_E2F5 2.957 E2F2
E2F5
EPAS1_BCL3 2.944 EPAS1
BCL3
CXXC1 2.838 CXXC1
EBF1 2.824 EBF1
SPIB 2.769 SPIB
TEAD3_TEAD1 2.744 TEAD3
TEAD1
BPTF 2.718 BPTF
TAL1 2.662 TAL1
MAZ_ZNF281_GTF2F1 2.657 MAZ
ZNF281
GTF2F1
TBP 2.604 TBP
ZEB1 2.595 ZEB1
E2F3 2.568 E2F3
NFIX_NFIB 2.562 NFIX
NFIB
RCOR1_MTA3 2.559 RCOR1
MTA3
ESRRA_ESR2 2.548 ESRRA
ESR2
ARNT 2.453 ARNT
ZFX 2.452 ZFX
SOX3_SOX2 2.410 SOX3
SOX2
PLAGL1 2.393 PLAGL1
REST 2.364 REST
ETV1_ERF_FEV_ELF1 2.347 ETV1
ERF
FEV
ELF1
SPIC 2.296 SPIC
RUNX1_RUNX2 2.277 RUNX1
RUNX2
ESRRB_ESRRG 2.238 ESRRB
ESRRG
HIC1 2.231 HIC1
MYBL2 2.205 MYBL2
SIX5_SMARCC2_HCFC1 2.203 SIX5
SMARCC2
HCFC1
POU2F2_POU3F1 2.188 POU2F2
POU3F1
ETS1 2.180 ETS1
NR3C1 2.164 NR3C1
ZNF384 2.144 ZNF384
HOXB6_PRRX2 2.132 HOXB6
PRRX2
TFDP1 2.123 TFDP1
ZBTB14 2.078 ZBTB14
TLX1_NFIC 2.069 TLX1
NFIC
BACH1_NFE2_NFE2L2 2.067 BACH1
NFE2
NFE2L2
XBP1 2.061 XBP1
PITX3 2.056 PITX3
MAX_TFEB 2.055 MAX
TFEB
RFX7_RFX4_RFX1 2.052 RFX7
RFX4
RFX1
HSF4 2.046 HSF4
HNF1A_HNF1B 2.005 HNF1A
HNF1B
SP1 1.985 SP1
SP3 1.972 SP3
SRF 1.956 SRF
KLF8 1.951 KLF8
FOXM1_TBL1XR1 1.949 FOXM1
TBL1XR1
GAGGUAG 1.944 hsa-let-7a-5p
hsa-let-7b-5p
hsa-let-7c-5p
hsa-let-7d-5p
hsa-let-7e-5p
hsa-let-7f-5p
hsa-let-7g-5p
hsa-let-7i-5p
hsa-miR-98-5p
hsa-miR-4458
hsa-miR-4500
YY1_YY2 1.943 YY1
YY2
MECP2 1.908 MECP2
CREB1 1.906 CREB1
CUX2 1.905 CUX2
BARHL1 1.866 BARHL1
EZH2 1.864 EZH2
IKZF1 1.853 IKZF1
POU3F2 1.847 POU3F2
PAX5 1.843 PAX5
ATF2_ATF1_ATF3 1.838 ATF2
ATF1
ATF3
GATA3 1.837 GATA3
BATF 1.827 BATF
TCF12_ASCL2 1.822 TCF12
ASCL2
GATA1_GATA4 1.821 GATA1
GATA4
E2F8 1.813 E2F8
FOXK1_FOXP2_FOXB1_FOXP3 1.795 FOXK1
FOXP2
FOXB1
FOXP3
ETV6 1.746 ETV6
FLI1 1.738 FLI1
GGAAUGU 1.731 hsa-miR-1-3p
hsa-miR-206
hsa-miR-613
PITX1 1.724 PITX1
MEIS2 1.723 MEIS2
SIN3A_CHD1 1.717 SIN3A
CHD1
ZNF784 1.711 ZNF784
FOSL2_SMARCC1 1.707 FOSL2
SMARCC1
AAAGUGC 1.693 hsa-miR-17-5p
hsa-miR-20a-5p
hsa-miR-20b-5p
hsa-miR-93-5p
hsa-miR-106a-5p
hsa-miR-106b-5p
hsa-miR-519d-3p
hsa-miR-526b-3p
MLXIPL 1.671 MLXIPL
STAT1_STAT3_BCL6 1.667 STAT1
STAT3
BCL6
KLF16_SP2 1.664 KLF16
SP2
MNT_HEY1_HEY2 1.651 MNT
HEY1
HEY2
IRX3 1.650 IRX3
CUX1 1.650 CUX1
TFAP2C 1.637 TFAP2C
RARG 1.626 RARG
PATZ1_KLF4 1.603 PATZ1
KLF4
SMAD4 1.593 SMAD4
HIVEP1 1.586 HIVEP1
SP4_PML 1.585 SP4
PML
AHR_ARNT2 1.582 AHR
ARNT2
KLF1 1.575 KLF1
ETV3 1.570 ETV3
FOXL1 1.565 FOXL1
HOXC10_HOXD13 1.555 HOXC10
HOXD13
NFKB1 1.553 NFKB1
NR5A2 1.534 NR5A2
HIC2 1.532 HIC2
CCCUGAG 1.509 hsa-miR-125a-5p
hsa-miR-125b-5p
hsa-miR-4319
NFATC2_NFATC3 1.501 NFATC2
NFATC3
NFIL3 1.497 NFIL3
UGUGCUU 1.480 hsa-miR-218-5p
AGCACCA 1.474 hsa-miR-29a-3p
hsa-miR-29b-3p
hsa-miR-29c-3p
SPDEF 1.465 SPDEF
TCF3_MYOG 1.458 TCF3
MYOG
AAGGCAC 1.448 hsa-miR-124-3p.1
GATA2 1.444 GATA2
MEF2D_MEF2A 1.440 MEF2D
MEF2A
ZIC2_GLI1 1.425 ZIC2
GLI1
CEBPA 1.417 CEBPA
TGIF1 1.408 TGIF1
MLX_USF2_USF1_PAX2 1.408 MLX
USF2
USF1
PAX2
HMX3 1.407 HMX3
CUUUGGU 1.404 hsa-miR-9-5p
ZBTB6 1.397 ZBTB6
SREBF1_TFE3 1.387 SREBF1
TFE3
CLOCK 1.387 CLOCK
ERG 1.376 ERG
POU3F3_POU3F4 1.371 POU3F3
POU3F4
ESR1 1.369 ESR1
TBX1 1.367 TBX1
MAF_NRL 1.365 MAF
NRL
ZNF263 1.361 ZNF263
ELF3_EHF 1.353 ELF3
EHF
RUNX3_BCL11A 1.353 RUNX3
BCL11A
KLF6 1.353 KLF6
HOMEZ 1.338 HOMEZ
SCRT1_SCRT2 1.337 SCRT1
SCRT2
NKX2-2 1.331 NKX2-2
FIGLA 1.331 FIGLA
ZNF740_ZNF219 1.324 ZNF740
ZNF219
NHLH1 1.322 NHLH1
FOXQ1 1.320 FOXQ1
RHOXF1 1.317 RHOXF1
BHLHE40 1.311 BHLHE40
AR_NR3C2 1.309 AR
NR3C2
BARX1 1.307 BARX1
RFX5 1.306 RFX5
HNF4G 1.299 HNF4G
UUGGCAC 1.297 hsa-miR-96-5p
hsa-miR-1271-5p
SHOX2_HOXC5 1.289 SHOX2
HOXC5
E2F6 1.288 E2F6
FOXD1_FOXO1_FOXO6_FOXG1_FOXP1 1.288 FOXD1
FOXO1
FOXO6
FOXG1
FOXP1
STAT5A 1.286 STAT5A
REL 1.269 REL
PPARG 1.268 PPARG
TBX5 1.258 TBX5
FOSL1 1.257 FOSL1
HOXC8 1.249 HOXC8
ZNF652 1.238 ZNF652
TP63 1.237 TP63
EP300 1.229 EP300
GLI2 1.227 GLI2
VSX1 1.226 VSX1
CREB3L1_CREB3 1.225 CREB3L1
CREB3
HSF1 1.225 HSF1
AAUACUG 1.223 hsa-miR-200b-3p
hsa-miR-200c-3p
hsa-miR-429
ATF6 1.222 ATF6
IRF7 1.222 IRF7
UAGUGUU 1.217
UCCAGUU 1.217 hsa-miR-145-5p
hsa-miR-5195-3p
SOX13_SOX12 1.214 SOX13
SOX12
PTF1A 1.214 PTF1A
MAFB 1.212 MAFB
CREB5_CREM_JUNB 1.211 CREB5
CREM
JUNB
CEBPE_CEBPD 1.209 CEBPE
CEBPD
KLF14_SP8 1.208 KLF14
SP8
SOX17 1.205 SOX17
PBX3 1.204 PBX3
IRF6_IRF4_IRF5 1.196 IRF6
IRF4
IRF5
NR2E3 1.192 NR2E3
MZF1 1.181 MZF1
GUGCAAA 1.174 hsa-miR-19a-3p
hsa-miR-19b-3p
ATF4 1.168 ATF4
SRY 1.164 SRY
MAFK 1.164 MAFK
TFAP2B 1.162 TFAP2B
TFCP2 1.162 TFCP2
CPEB1 1.157 CPEB1
MYF6 1.152 MYF6
FOXA1 1.150 FOXA1
HIF1A 1.141 HIF1A
NR2E1 1.139 NR2E1
SP100 1.135 SP100
NFATC4 1.120 NFATC4
MEF2C 1.118 MEF2C
TBX15_MGA 1.115 TBX15
MGA
NR1H4 1.108 NR1H4
NFKB2 1.105 NFKB2
PAX3 1.105 PAX3
TLX2 1.103 TLX2
ISX 1.099 ISX
RXRA_NR2F6_NR2C2 1.095 RXRA
NR2F6
NR2C2
ZBTB7A_ZBTB7C 1.093 ZBTB7A
ZBTB7C
GFI1B 1.093 GFI1B
HNF4A 1.089 HNF4A
STAT5B 1.088 STAT5B
MESP1 1.085 MESP1
EMX1 1.082 EMX1
HOXC13 1.081 HOXC13
TFAP4_MSC 1.077 TFAP4
MSC
DLX4_HOXD8 1.077 DLX4
HOXD8
FOXO4 1.077 FOXO4
CTCF_CTCFL 1.071 CTCF
CTCFL
GCM1 1.069 GCM1
HOXA1 1.068 HOXA1
HOXD10 1.060 HOXD10
CREB3L2 1.057 CREB3L2
OTX1 1.055 OTX1
EOMES 1.044 EOMES
TEAD4 1.043 TEAD4
NR1I2 1.043 NR1I2
BACH2 1.040 BACH2
PPARA 1.039 PPARA
EGR3_EGR2 1.037 EGR3
EGR2
ETV2 1.036 ETV2
GGCAGUG 1.035 hsa-miR-34a-5p
hsa-miR-34c-5p
hsa-miR-449a
hsa-miR-449b-5p
HOXB2_UNCX_HOXD3 1.034 HOXB2
UNCX
HOXD3
GLI3 1.032 GLI3
ZNF524 1.029 ZNF524
DPRX 1.028 DPRX
NKX6-2 1.027 NKX6-2
HOXC12_HOXD12 1.023 HOXC12
HOXD12
FOXA2_FOXJ3 1.022 FOXA2
FOXJ3
HOXB8 1.019 HOXB8
RELA 1.014 RELA
SOX9 1.014 SOX9
UGCAUAG 1.012 hsa-miR-153-3p
MYOD1 1.009 MYOD1
DUXA 1.008 DUXA
E2F4 0.997 E2F4
JUN 0.996 JUN
NR6A1 0.996 NR6A1
ETV4_ETS2 0.994 ETV4
ETS2
HES1 0.988 HES1
RORA 0.984 RORA
CEBPB 0.983 CEBPB
SOX5 0.983 SOX5
HLF_TEF 0.981 HLF
TEF
OSR1_OSR2 0.976 OSR1
OSR2
AGCAGCA 0.976 hsa-miR-15a-5p
hsa-miR-15b-5p
hsa-miR-16-5p
hsa-miR-195-5p
hsa-miR-424-5p
hsa-miR-497-5p
hsa-miR-6838-5p
RARB 0.973 RARB
NFAT5 0.970 NFAT5
NR4A2 0.968 NR4A2
GTF2I 0.966 GTF2I
TBX19 0.965 TBX19
ZKSCAN1 0.963 ZKSCAN1
EBF3 0.963 EBF3
THRA_RXRB 0.962 THRA
RXRB
FOXD3_FOXI1_FOXF1 0.962 FOXD3
FOXI1
FOXF1
ZBTB4 0.961 ZBTB4
MAFF_MAFG 0.960 MAFF
MAFG
UAAGGCA 0.959 hsa-miR-124-3p.2
hsa-miR-506-3p
TP53 0.958 TP53
MECOM 0.958 MECOM
OLIG2_NEUROD1_ATOH1 0.957 OLIG2
NEUROD1
ATOH1
TCF21 0.956 TCF21
HESX1 0.956 HESX1
FOXO3_FOXD2 0.954 FOXO3
FOXD2
MSX1 0.950 MSX1
AGUGCAA 0.946 hsa-miR-130a-3p
hsa-miR-130b-3p
hsa-miR-301a-3p
hsa-miR-301b-3p
hsa-miR-454-3p
hsa-miR-3666
hsa-miR-4295
TBX21_TBR1 0.946 TBX21
TBR1
NFIA 0.945 NFIA
ZNF148 0.941 ZNF148
HMX2 0.940 HMX2
RXRG 0.939 RXRG
ZIC1 0.937 ZIC1
NKX3-2 0.935 NKX3-2
EN1_ESX1_GBX1 0.934 EN1
ESX1
GBX1
SMAD2 0.933 SMAD2
BARHL2 0.933 BARHL2
STAT4 0.926 STAT4
T 0.924 T
GGCUCAG 0.922 hsa-miR-24-3p
ETV7 0.918 ETV7
AUGGCAC 0.917 hsa-miR-183-5p.1
GUAAACA 0.916 hsa-miR-30a-5p
hsa-miR-30b-5p
hsa-miR-30c-5p
hsa-miR-30d-5p
hsa-miR-30e-5p
MIXL1_GSX1_BSX_MEOX2_LHX4 0.912 MIXL1
GSX1
BSX
MEOX2
LHX4
TFAP2E 0.905 TFAP2E
RELB 0.904 RELB
POU2F1 0.904 POU2F1
PAX4 0.903 PAX4
TWIST1_SNAI1 0.901 TWIST1
SNAI1
MBD2 0.901 MBD2
RBPJ 0.901 RBPJ
KLF3 0.897 KLF3
TBX3 0.897 TBX3
CAGUAGU 0.894 hsa-miR-199a-3p
hsa-miR-199b-3p
hsa-miR-3129-5p
ZBTB12 0.892 ZBTB12
CDX1 0.892 CDX1
SOX6 0.891 SOX6
FOXJ2 0.891 FOXJ2
LEF1 0.891 LEF1
TFCP2L1 0.889 TFCP2L1
HBP1 0.888 HBP1
HSFY2 0.886 HSFY2
UGGUCCC 0.886 hsa-miR-133a-3p.1
AGCCCUU 0.886 hsa-miR-129-1-3p
hsa-miR-129-2-3p
KLF15 0.884 KLF15
ARID3A 0.883 ARID3A
HMGA1 0.883 HMGA1
PLAG1 0.881 PLAG1
ACAUUCA 0.880 hsa-miR-181a-5p
hsa-miR-181b-5p
hsa-miR-181c-5p
hsa-miR-181d-5p
hsa-miR-4262
NR2F2 0.879 NR2F2
AUGGCUU 0.879 hsa-miR-135a-5p
hsa-miR-135b-5p
PAX7_NOBOX 0.875 PAX7
NOBOX
IRF3 0.874 IRF3
UAUUGCU 0.867 hsa-miR-137
GUAGUGU 0.865 hsa-miR-142-3p.1
HMX1 0.863 HMX1
MEIS1 0.854 MEIS1
AUAAAGU 0.854 hsa-miR-142-5p
hsa-miR-5590-3p
PKNOX1_TGIF2 0.854 PKNOX1
TGIF2
HOXD11_HOXA11 0.853 HOXD11
HOXA11
HSF2 0.851 HSF2
PBX1 0.848 PBX1
KLF13 0.846 KLF13
KLF12 0.844 KLF12
HOXC11 0.843 HOXC11
PAX6 0.843 PAX6
EGR1_EGR4 0.842 EGR1
EGR4
GFI1 0.841 GFI1
NR0B1 0.841 NR0B1
NFATC1 0.840 NFATC1
ZNF282 0.838 ZNF282
DLX3_EVX1_MEOX1 0.838 DLX3
EVX1
MEOX1
TCF7 0.836 TCF7
HMBOX1 0.835 HMBOX1
GSC_GSC2 0.835 GSC
GSC2
PAX8 0.833 PAX8
MAFA 0.830 MAFA
FOSB 0.830 FOSB
HOXB3 0.827 HOXB3
GCM2 0.825 GCM2
CDC5L 0.824 CDC5L
GLIS2 0.822 GLIS2
JDP2 0.821 JDP2
ACAGUAU 0.820 hsa-miR-144-3p
ISL1 0.819 ISL1
PRDM1 0.819 PRDM1
DBX2_HLX 0.818 DBX2
HLX
SOX8 0.818 SOX8
HOXB7 0.815 HOXB7
NKX2-6 0.814 NKX2-6
TCF7L2 0.812 TCF7L2
SOX10_SOX15 0.808 SOX10
SOX15
IRF9 0.804 IRF9
GMEB1 0.802 GMEB1
RAD21_SMC3 0.799 RAD21
SMC3
RREB1 0.798 RREB1
LHX6 0.797 LHX6
HOXA9 0.796 HOXA9
SOX4 0.795 SOX4
SMAD3 0.793 SMAD3
TBX2 0.789 TBX2
HOXA2_HOXB1 0.787 HOXA2
HOXB1
CENPB 0.787 CENPB
TFEC_MITF_ARNTL_BHLHE41 0.785 TFEC
MITF
ARNTL
BHLHE41
NR4A3 0.784 NR4A3
PDX1 0.782 PDX1
NFE2L1 0.781 NFE2L1
ARID5A 0.775 ARID5A
HOXD4 0.775 HOXD4
CEBPG 0.773 CEBPG
AIRE 0.771 AIRE
ZBTB18 0.769 ZBTB18
TBX4 0.768 TBX4
SOX14 0.768 SOX14
PRRX1_ALX4_PHOX2A 0.768 PRRX1
ALX4
PHOX2A
SIX6 0.763 SIX6
AACACUG 0.761 hsa-miR-141-3p
hsa-miR-200a-3p
HOXC9 0.760 HOXC9
TP73 0.758 TP73
HOXA10_HOXB9 0.754 HOXA10
HOXB9
JUND 0.754 JUND
HOXB4_LHX9 0.753 HOXB4
LHX9
RARA 0.736 RARA
TCF7L1 0.734 TCF7L1
CAGUGCA 0.727 hsa-miR-148a-3p
hsa-miR-148b-3p
hsa-miR-152-3p
SIX1_SIX3_SIX2 0.726 SIX1
SIX3
SIX2
DLX1_HOXA3_BARX2 0.726 DLX1
HOXA3
BARX2
VDR 0.725 VDR
ZIC3_ZIC4 0.724 ZIC3
ZIC4
POU6F2 0.722 POU6F2
ZBTB16 0.722 ZBTB16
NR4A1 0.721 NR4A1
SOX18 0.721 SOX18
MEF2B 0.721 MEF2B
NKX2-4 0.717 NKX2-4
ZNF691 0.715 ZNF691
NKX2-8 0.712 NKX2-8
POU1F1 0.710 POU1F1
AGCUUAU 0.710 hsa-miR-21-5p
hsa-miR-590-5p
NR1H2 0.709 NR1H2
POU4F1_POU4F3 0.705 POU4F1
POU4F3
STAT6 0.700 STAT6
ZSCAN4 0.697 ZSCAN4
LHX8 0.697 LHX8
NR1D1 0.695 NR1D1
ATF7 0.693 ATF7
HES7_HES5 0.692 HES7
HES5
OTP_PHOX2B_LHX1_LMX1A_LHX5_HOXC4 0.691 OTP
PHOX2B
LHX1
LMX1A
LHX5
HOXC4
HOXC4
NKX2-5 0.691 NKX2-5
ONECUT1 0.687 ONECUT1
DBP 0.685 DBP
FOXF2_FOXJ1 0.676 FOXF2
FOXJ1
IRX5 0.674 IRX5
INSM1 0.674 INSM1
FOXA3_FOXC2 0.672 FOXA3
FOXC2
SREBF2 0.672 SREBF2
ZBTB49 0.670 ZBTB49
GATA6 0.665 GATA6
OLIG3_NEUROD2_NEUROG2 0.662 OLIG3
NEUROD2
NEUROG2
MEIS3_TGIF2LX 0.660 MEIS3
TGIF2LX
PROX1 0.659 PROX1
EMX2 0.658 EMX2
UACAGUA 0.657 hsa-miR-101-3p.2
ATF5 0.654 ATF5
NKX2-3 0.653 NKX2-3
ONECUT2_ONECUT3 0.653 ONECUT2
ONECUT3
PGR 0.650 PGR
FOXC1 0.650 FOXC1
UCACAUU 0.649 hsa-miR-23a-3p
hsa-miR-23b-3p
hsa-miR-23c
hsa-miR-130a-5p
IKZF2 0.648 IKZF2
IRX2 0.646 IRX2
ZNF423 0.644 ZNF423
CACAGUG 0.643 hsa-miR-128-3p
hsa-miR-216a-3p
hsa-miR-3681-3p
GCAGCAU 0.641 hsa-miR-103a-3p
hsa-miR-107
ZBTB3 0.637 ZBTB3
HOXC6_HOXA7 0.637 HOXC6
HOXA7
AUUGCAC 0.636 hsa-miR-25-3p
hsa-miR-32-5p
hsa-miR-92a-3p
hsa-miR-92b-3p
hsa-miR-363-3p
hsa-miR-367-3p
LMX1B_MNX1_RAX2 0.635 LMX1B
MNX1
RAX2
GATA5 0.635 GATA5
ZNF350 0.631 ZNF350
SOX30 0.625 SOX30
OTX2_CRX 0.625 OTX2
CRX
ZNF274 0.624 ZNF274
HOXA13 0.623 HOXA13
NOTO_VSX2_DLX2_DLX6_NKX6-1 0.623 NOTO
VSX2
DLX2
DLX6
NKX6-1
SOX7 0.622 SOX7
SOX7
ZNF8 0.619 ZNF8
ZNF8
AGCUGCC 0.618 hsa-miR-22-3p
UCACAGU 0.616 hsa-miR-27a-3p
hsa-miR-27b-3p
ALX3 0.614 ALX3
GCUGGUG 0.614 hsa-miR-138-5p
ZNF232 0.613 ZNF232
MYBL1 0.612 MYBL1
FOXN1 0.612 FOXN1
E4F1 0.611 E4F1
HINFP 0.609 HINFP
SHOX 0.608 SHOX
SHOX
NR2F1 0.608 NR2F1
ISL2 0.606 ISL2
NKX3-1 0.606 NKX3-1
UGGCACU 0.604
PKNOX2 0.604 PKNOX2
POU6F1 0.603 POU6F1
NR2C1 0.600 NR2C1
AAGUGCU 0.597 hsa-miR-302a-3p
hsa-miR-302b-3p
hsa-miR-302c-3p.1
hsa-miR-302d-3p
hsa-miR-302e
hsa-miR-372-3p
hsa-miR-373-3p
hsa-miR-520a-3p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520d-3p
hsa-miR-520e
ARID5B 0.596 ARID5B
THRB 0.595 THRB
NKX2-1 0.591 NKX2-1
HOXD9 0.590 HOXD9
SOX21 0.589 SOX21
OLIG1 0.585 OLIG1
CDX2 0.584 CDX2
CCUUCAU 0.584 hsa-miR-205-5p
NANOG 0.579 NANOG
DDIT3 0.563 DDIT3
ZNF333 0.562 ZNF333
PPARD 0.557 PPARD
TBX20 0.555 TBX20
MSX2 0.551 MSX2
CCAGUGU 0.551 hsa-miR-199a-5p
hsa-miR-199b-5p
VAX1_GSX2 0.542 VAX1
GSX2
HOXA5 0.542 HOXA5
UUGGUCC 0.540 hsa-miR-133a-3p.2
hsa-miR-133b
GGAAGAC 0.539 hsa-miR-7-5p
VAX2_RHOXF2 0.538 VAX2
RHOXF2
HOXA6 0.538 HOXA6
FUBP1 0.537 FUBP1
AGUGGUU 0.536 hsa-miR-140-5p
UUGGCAA 0.536 hsa-miR-182-5p
AGUGCUU 0.533 hsa-miR-302c-3p.2
hsa-miR-520f-3p
PRDM4 0.531 PRDM4
PAX1_PAX9 0.530 PAX1
PAX9
GRHL1 0.523 GRHL1
EN2_GBX2_LBX2 0.522 EN2
GBX2
LBX2
HMGA2 0.520 HMGA2
HINFP1 0.520
SOX11 0.518 SOX11
LHX2 0.516 LHX2
HOXA4 0.515 HOXA4
HAND1 0.514 HAND1
SOX1 0.512 SOX1
GLIS3 0.510 GLIS3
BHLHE22_BHLHA15_BHLHE23 0.504 BHLHE22
BHLHA15
BHLHE23
EVX2 0.501 EVX2
CBFB 0.500 CBFB
ACUGCAU 0.497 hsa-miR-217
hsa-miR-6807-3p
DRGX_PROP1 0.492 DRGX
PROP1
ACAGUAC 0.490 hsa-miR-101-3p.1
GZF1 0.489 GZF1
VENTX 0.487 VENTX
BCL6B 0.482 BCL6B
HOXB5 0.481 HOXB5
NKX1-2_RAX 0.481 NKX1-2
RAX
GAUUGUC 0.481 hsa-miR-219a-5p
hsa-miR-4782-3p
hsa-miR-6766-3p
LHX3 0.470 LHX3
BATF3 0.467 BATF3
NR1I3 0.465 NR1I3
UBP1 0.464 UBP1
BRCA1 0.463 BRCA1
PRDM14 0.463 PRDM14
ZNF35 0.460 ZNF35
GUAACAG 0.457 hsa-miR-194-5p
ZKSCAN3 0.452 ZKSCAN3
POU4F2 0.452 POU4F2
PBX2 0.446 PBX2
AGCAGCG 0.441 hsa-miR-503-5p
BBX 0.440 BBX
UGAAAUG 0.435
AAGGUGC 0.434 hsa-miR-18a-5p
hsa-miR-18b-5p
hsa-miR-4735-3p
SIX4 0.433 SIX4
HOXD1 0.425 HOXD1
ZFHX3 0.422 ZFHX3
CUGGCUG 0.422 hsa-miR-3064-5p
hsa-miR-6504-5p
GUCAGUU 0.421 hsa-miR-223-3p
AACAGUC 0.420 hsa-miR-132-3p
hsa-miR-212-3p
KLF7 0.415 KLF7
UAAUGCU 0.407 hsa-miR-155-5p
AGGUAGU 0.405 hsa-miR-196a-5p
hsa-miR-196b-5p
DMC1 0.395 DMC1
HOXB13 0.394 HOXB13
DMBX1 0.393 DMBX1
GCUACAU 0.392 hsa-miR-221-3p
hsa-miR-222-3p
AUGUGCC 0.388 hsa-miR-455-5p
PITX2 0.387 PITX2
GAGAUGA 0.385 hsa-miR-143-3p
hsa-miR-4770
hsa-miR-6088
ZNF410 0.380 ZNF410
NKX1-1 0.367 NKX1-1
ACCCUGU 0.358 hsa-miR-10a-5p
hsa-miR-10b-5p
ZBED1 0.353 ZBED1
ZBED1
IRX6_IRX4 0.340 IRX6
IRX4
ACUGGCC 0.339 hsa-miR-193a-3p
hsa-miR-193b-3p
ALX1_ARX 0.322 ALX1
ARX
RORC 0.319 RORC
GGCAAGA 0.310 hsa-miR-31-5p
UUGUUCG 0.304 hsa-miR-375
DLX5 0.298 DLX5
AAUGCCC 0.291 hsa-miR-365a-3p
hsa-miR-365b-3p
UCCCUUU 0.288 hsa-miR-204-5p
hsa-miR-211-5p
GLIS1 0.279 GLIS1
UGCAGUC 0.278 hsa-miR-455-3p.2
ACCACAG 0.278 hsa-miR-140-3p.2
HDX 0.277 HDX
OVOL1 0.274 OVOL1
NKX6-3 0.269 NKX6-3
UAAGACU 0.262 hsa-miR-499a-5p
UAAGACG 0.255 hsa-miR-208a-3p
hsa-miR-208b-3p
CCACAGG 0.249 hsa-miR-140-3p.1
UGCAUUG 0.245 hsa-miR-33a-5p
hsa-miR-33b-5p
CAGUCCA 0.245 hsa-miR-455-3p.1
AAUCUCU 0.217 hsa-miR-216b-5p
CCAGCAU 0.213 hsa-miR-338-3p
GGAGUGU 0.208 hsa-miR-122-5p
AAUCUCA 0.204 hsa-miR-216a-5p
GAUAUGU 0.183 hsa-miR-190a-5p
hsa-miR-190b
UGACAUC 0.180 hsa-miR-489-3p
AACCUGG 0.179 hsa-miR-490-3p
CCUUGGC 0.178 hsa-miR-212-5p
UGACCUA 0.141 hsa-miR-192-5p
hsa-miR-215-5p
GCCUGUC 0.139 hsa-miR-214-5p
CUACAGU 0.138 hsa-miR-139-5p
CGUACCG 0.113 hsa-miR-126-3p.1
CACCUCC 0.103 hsa-miR-1306-5p
GGACGGA 0.090 hsa-miR-184
AACGGAA 0.089 hsa-miR-191-5p
UUUUUGC 0.066 hsa-miR-129-5p
AUGACAC 0.061 hsa-miR-425-5p
GAGAACU 0.060 hsa-miR-146a-5p
hsa-miR-146b-5p
hsa-miR-7153-5p
GAUCAGA 0.056 hsa-miR-383-5p.1
ACCCGUA 0.053 hsa-miR-99a-5p
hsa-miR-99b-5p
hsa-miR-100-5p
UGUGCGU 0.049 hsa-miR-210-3p
AGAUCAG 0.031 hsa-miR-383-5p.2
AACCGUU 0.025 hsa-miR-451a
CGUGUCU 0.025 hsa-miR-187-3p
GUACCGU 0.007 hsa-miR-126-3p.2

All samples sorted alphabetically


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Project name:

Sample name Condition Replicate/Batch
GNF_1_721_B_lymphoblasts
GNF_1_ADIPOCYTE
GNF_1_AdrenalCortex
GNF_1_adrenalgland
GNF_1_Amygdala
GNF_1_Appendix
GNF_1_atrioventricularnode
GNF_1_BM.CD105.Endothelial
GNF_1_BM.CD33.Myeloid
GNF_1_BM.CD34.
GNF_1_BM.CD71.EarlyErythroid
GNF_1_bonemarrow
GNF_1_bronchialepithelialcells
GNF_1_CardiacMyocytes
GNF_1_caudatenucleus
GNF_1_cerebellum
GNF_1_CerebellumPeduncles
GNF_1_ciliaryganglion
GNF_1_CingulateCortex
GNF_1_ColorectalAdenocarcinoma
GNF_1_DRG
GNF_1_fetalbrain
GNF_1_fetalliver
GNF_1_fetallung
GNF_1_fetalThyroid
GNF_1_globuspallidus
GNF_1_Heart
GNF_1_Hypothalamus
GNF_1_kidney
GNF_1_leukemiachronicmyelogenous.k562.
GNF_1_leukemialymphoblastic.molt4.
GNF_1_leukemiapromyelocytic.hl60.
GNF_1_Liver
GNF_1_Lung
GNF_1_lymphnode
GNF_1_lymphomaburkittsDaudi
GNF_1_lymphomaburkittsRaji
GNF_1_MedullaOblongata
GNF_1_OccipitalLobe
GNF_1_OlfactoryBulb
GNF_1_Ovary
GNF_1_Pancreas
GNF_1_PancreaticIslets
GNF_1_ParietalLobe
GNF_1_PB.BDCA4.Dentritic_Cells
GNF_1_PB.CD14.Monocytes
GNF_1_PB.CD19.Bcells
GNF_1_PB.CD4.Tcells
GNF_1_PB.CD56.NKCells
GNF_1_PB.CD8.Tcells
GNF_1_Pituitary
GNF_1_PLACENTA
GNF_1_Pons
GNF_1_PrefrontalCortex
GNF_1_Prostate
GNF_1_salivarygland
GNF_1_SkeletalMuscle
GNF_1_skin
GNF_1_SmoothMuscle
GNF_1_spinalcord
GNF_1_subthalamicnucleus
GNF_1_SuperiorCervicalGanglion
GNF_1_TemporalLobe
GNF_1_testis
GNF_1_TestisGermCell
GNF_1_TestisInterstitial
GNF_1_TestisLeydigCell
GNF_1_TestisSeminiferousTubule
GNF_1_Thalamus
GNF_1_thymus
GNF_1_Thyroid
GNF_1_TONGUE
GNF_1_Tonsil
GNF_1_trachea
GNF_1_TrigeminalGanglion
GNF_1_Uterus
GNF_1_UterusCorpus
GNF_1_WHOLEBLOOD
GNF_1_WholeBrain
GNF_2_721_B_lymphoblasts
GNF_2_ADIPOCYTE
GNF_2_AdrenalCortex
GNF_2_adrenalgland
GNF_2_Amygdala
GNF_2_Appendix
GNF_2_atrioventricularnode
GNF_2_BM.CD105.Endothelial
GNF_2_BM.CD33.Myeloid
GNF_2_BM.CD34.
GNF_2_BM.CD71.EarlyErythroid
GNF_2_bonemarrow
GNF_2_bronchialepithelialcells
GNF_2_CardiacMyocytes
GNF_2_caudatenucleus
GNF_2_cerebellum
GNF_2_CerebellumPeduncles
GNF_2_ciliaryganglion
GNF_2_CingulateCortex
GNF_2_ColorectalAdenocarcinoma
GNF_2_DRG
GNF_2_fetalbrain
GNF_2_fetalliver
GNF_2_fetallung
GNF_2_fetalThyroid
GNF_2_globuspallidus
GNF_2_Heart
GNF_2_Hypothalamus
GNF_2_kidney
GNF_2_leukemiachronicmyelogenous.k562.
GNF_2_leukemialymphoblastic.molt4.
GNF_2_leukemiapromyelocytic.hl60.
GNF_2_Liver
GNF_2_Lung
GNF_2_lymphnode
GNF_2_lymphomaburkittsDaudi
GNF_2_lymphomaburkittsRaji
GNF_2_MedullaOblongata
GNF_2_OccipitalLobe
GNF_2_OlfactoryBulb
GNF_2_Ovary
GNF_2_Pancreas
GNF_2_PancreaticIslets
GNF_2_ParietalLobe
GNF_2_PB.BDCA4.Dentritic_Cells
GNF_2_PB.CD14.Monocytes
GNF_2_PB.CD19.Bcells
GNF_2_PB.CD4.Tcells
GNF_2_PB.CD56.NKCells
GNF_2_PB.CD8.Tcells
GNF_2_Pituitary
GNF_2_PLACENTA
GNF_2_Pons
GNF_2_PrefrontalCortex
GNF_2_Prostate
GNF_2_salivarygland
GNF_2_SkeletalMuscle
GNF_2_skin
GNF_2_SmoothMuscle
GNF_2_spinalcord
GNF_2_subthalamicnucleus
GNF_2_SuperiorCervicalGanglion
GNF_2_TemporalLobe
GNF_2_testis
GNF_2_TestisGermCell
GNF_2_TestisInterstitial
GNF_2_TestisLeydigCell
GNF_2_TestisSeminiferousTubule
GNF_2_Thalamus
GNF_2_thymus
GNF_2_Thyroid
GNF_2_TONGUE
GNF_2_Tonsil
GNF_2_trachea
GNF_2_TrigeminalGanglion
GNF_2_Uterus
GNF_2_UterusCorpus
GNF_2_WHOLEBLOOD
GNF_2_WholeBrain
NCI60_1_786.0
NCI60_1_A498
NCI60_1_A549_ATCC
NCI60_1_ACHN
NCI60_1_BT.549
NCI60_1_CAKI.1
NCI60_1_CCRF.CEM
NCI60_1_COLO205
NCI60_1_DU.145
NCI60_1_EKVX
NCI60_1_HCC.2998
NCI60_1_HCT.116
NCI60_1_HCT.15
NCI60_1_HL.60
NCI60_1_HOP.62
NCI60_1_HOP.92
NCI60_1_HS578T
NCI60_1_HT29
NCI60_1_IGROV1_rep1
NCI60_1_IGROV1_rep2
NCI60_1_K.562
NCI60_1_KM12
NCI60_1_LOXIMVI
NCI60_1_M14
NCI60_1_MALME.3M
NCI60_1_MCF7
NCI60_1_MDA.MB.231_ATCC
NCI60_1_MDA.MB.435
NCI60_1_MDA.N
NCI60_1_MOLT.4
NCI60_1_NCI.ADR.RES
NCI60_1_NCI.H226
NCI60_1_NCI.H322M
NCI60_1_NCI.H460
NCI60_1_NCI.H522
NCI60_1_OVCAR.3
NCI60_1_OVCAR.4
NCI60_1_OVCAR.5
NCI60_1_OVCAR.8
NCI60_1_PC.3
NCI60_1_RPMI.8226
NCI60_1_RXF.393
NCI60_1_SF.268
NCI60_1_SF.295
NCI60_1_SF.539
NCI60_1_SK.MEL.28
NCI60_1_SK.MEL.2
NCI60_1_SK.MEL.5
NCI60_1_SK.OV.3
NCI60_1_SN12C
NCI60_1_SNB.19
NCI60_1_SNB.75
NCI60_1_SR
NCI60_1_SW.620
NCI60_1_T47D
NCI60_1_TK.10
NCI60_1_U251
NCI60_1_UACC.257
NCI60_1_UACC.62
NCI60_1_UO.31